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Bioinfo standard : AGP File
You are currently viewing a revision titled "Bioinfo standard : AGP File", saved on 19 January 2017 at 16 h 34 min by Sébastien Letort | |
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Title | Bioinfo standard : AGP File |
Content | AGP : A Golden Path version 2.0Specificationshttps://www.ncbi.nlm.nih.gov/assembly/agp/AGP_Specification/SamplesS1##agp-version 2.0 # ORGANISM: Homo sapiens # TAX_ID: 9606 # ASSEMBLY NAME: EG1 # ASSEMBLY DATE: 09-November-2011 # GENOME CENTER: NCBI # DESCRIPTION: Example AGP specifying the assembly of scaffolds from WGS contigs EG1_scaffold1 1 3043 1 W AADB02037551.1 1 3043 + EG1_scaffold2 1 40448 1 W AADB02037552.1 1 40448 + EG1_scaffold2 40449 40661 2 N 213 scaffold yes paired-ends EG1_scaffold2 40662 117642 3 W AADB02037553.1 1 76981 + EG1_scaffold2 117643 117718 4 N 76 scaffold yes paired-ends EG1_scaffold2 117719 145387 5 W AADB02037554.1 1 27669 + Recommended library?Comments? |
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